+ matrices[ 0 ].getSize() );
}
final List<Phylogeny> ps = new ArrayList<Phylogeny>();
- final NeighborJoining nj = NeighborJoining.createInstance( verbose );
+ final NeighborJoining nj = NeighborJoining.createInstance( verbose, 6 );
final long start_time = new Date().getTime();
for( final DistanceMatrix matrix : matrices ) {
ps.add( nj.execute( ( BasicSymmetricalDistanceMatrix ) matrix ) );