total_pfam_ids++;
boolean mapped = false;
for( final PfamToGoMapping pfam_to_go_mapping : pfam2go ) {
- if ( pfam_to_go_mapping.getKey().getId().equals( pfam_id ) ) {
+ if ( pfam_to_go_mapping.getKey().equals( pfam_id ) ) {
mapped = true;
System.out.println( pfam_to_go_mapping.getValue().toString() );
}
private static void printHelp() {
System.out.println();
System.out.println( PRG_NAME
- + " <pfam2go mapping file> <file with pfam accessors, newline and/or comma separated>" );
+ + " <pfam2go mapping file> <file with pfam accessors, newline and/or comma separated>" );
System.out.println();
}
}