else if ( o == _label_direction_cbmi ) {
updateOptions( getOptions() );
}
+ else if ( o == _abbreviate_scientific_names ) {
+ updateOptions( getOptions() );
+ }
else if ( o == _show_overview_cbmi ) {
updateOptions( getOptions() );
if ( getCurrentTreePanel() != null ) {
void buildViewMenu() {
_view_jmenu = MainFrame.createMenu( "View", getConfiguration() );
- _view_jmenu.add( _display_basic_information_item = new JMenuItem( "Display Basic Information" ) );
+ _view_jmenu
+ .add( _display_basic_information_item = new JMenuItem( MainFrame.SHOW_BASIC_TREE_INFORMATION_LABEL ) );
_view_jmenu.addSeparator();
_view_jmenu.add( _view_as_XML_item = new JMenuItem( "View as phyloXML" ) );
_view_jmenu.add( _view_as_NH_item = new JMenuItem( "View as Newick" ) );
GSDI gsdi = null;
final Phylogeny species_tree = _species_tree.copy();
try {
- gsdi = new GSDI( gene_tree, species_tree, false, true, true );
+ gsdi = new GSDI( gene_tree, species_tree, false, true, true, true );
}
catch ( final SDIException e ) {
JOptionPane.showMessageDialog( this,
GSDIR gsdir = null;
final Phylogeny species_tree = _species_tree.copy();
try {
- gsdir = new GSDIR( gene_tree, species_tree, true, true );
+ gsdir = new GSDIR( gene_tree, species_tree, true, true, true );
}
catch ( final SDIException e ) {
JOptionPane.showMessageDialog( this,