final static int swap = 4;
final static int color_subtree = 5;
final static int open_seq_web = 6;
- final static int open_tax_web = 7;
- final static int blast = 8;
- final static int cut_subtree = 9;
- final static int copy_subtree = 10;
- final static int paste_subtree = 11;
- final static int delete_subtree_or_node = 12;
- final static int add_new_node = 13;
- final static int edit_node_data = 14;
- final static int sort_descendents = 15;
- final static int get_ext_desc_data = 16;
- final static int select_nodes = 17;
+ final static int open_pdb_web = 7;
+ final static int open_tax_web = 8;
+ final static int blast = 9;
+ final static int cut_subtree = 10;
+ final static int copy_subtree = 11;
+ final static int paste_subtree = 12;
+ final static int delete_subtree_or_node = 13;
+ final static int add_new_node = 14;
+ final static int edit_node_data = 15;
+ final static int sort_descendents = 16;
+ final static int get_ext_desc_data = 17;
+ final static int select_nodes = 18;
// ---------------------------
// Display options for trees
// ---------------------------
final static String clickto_options[][] = {
{ "Display Node Data", "display" }, { "Collapse/Uncollapse", "display" }, { "Root/Reroot", "display" },
{ "Sub/Super Tree", "display" }, { "Swap Descendants", "display" },
- { "Colorize Subtree/Node(s)", "display" }, { "Open Sequence DB", "display" },
+ { "Colorize Subtree/Node(s)", "display" }, { "Open Sequence DB", "display" }, { "Open PDB", "display" },
{ "Open Taxonomy DB", "display" }, { "Blast", "display" }, { "Cut Subtree", "display" },
{ "Copy Subtree", "display" }, { "Paste Subtree", "display" }, { "Delete Subtree/Node", "display" },
{ "Add New Node", "display" }, { "Edit Node Data", "display" }, { "Sort Descendants", "display" },
else if ( name.equals( "open_seq_web" ) ) {
index = Configuration.open_seq_web;
}
+ else if ( name.equals( "open_pdb_web" ) ) {
+ index = Configuration.open_pdb_web;
+ }
else if ( name.equals( "open_tax_web" ) ) {
index = Configuration.open_tax_web;
}