in progress

[jalview.git] / forester / java / src / org / forester / archaeopteryx / ControlPanel.java

diff --git a/forester/java/src/org/forester/archaeopteryx/ControlPanel.java b/forester/java/src/org/forester/archaeopteryx/ControlPanel.java
index 6d7c316..3c9990f 100644 (file)
--- a/forester/java/src/org/forester/archaeopteryx/ControlPanel.java
+++ b/forester/java/src/org/forester/archaeopteryx/ControlPanel.java
@@ -551,6 +551,7 @@ final class ControlPanel extends JPanel implements ActionListener {
     }// addSequenceRelationBlock
 
     /* GUILHEM_END */
+    
     private List<Boolean> getIsDrawPhylogramList() {
         return _draw_phylogram;
     }
@@ -1380,6 +1381,11 @@ final class ControlPanel extends JPanel implements ActionListener {
     void displayedPhylogenyMightHaveChanged( final boolean recalc_longest_ext_node_info ) {
         if ( ( _mainpanel != null )
                 && ( ( _mainpanel.getCurrentPhylogeny() != null ) && !_mainpanel.getCurrentPhylogeny().isEmpty() ) ) {
+            
+            if ( recalc_longest_ext_node_info ) {
+                _mainpanel.getCurrentTreePanel().initNodeData();
+                _mainpanel.getCurrentTreePanel().calculateLongestExtNodeInfo();
+            }
             if ( getOptions().isShowOverview() ) {
                 _mainpanel.getCurrentTreePanel().updateOvSizes();
             }
@@ -1389,12 +1395,9 @@ final class ControlPanel extends JPanel implements ActionListener {
             _mainpanel.getCurrentTreePanel().calculateScaleDistance();
             _mainpanel.getCurrentTreePanel().calcMaxDepth();
             _mainpanel.adjustJScrollPane();
-            if ( recalc_longest_ext_node_info ) {
-                _mainpanel.getCurrentTreePanel().initNodeData();
-                _mainpanel.getCurrentTreePanel().calculateLongestExtNodeInfo();
-            }
+          
             _mainpanel.getCurrentTreePanel().repaint();
-            // _mainpanel.getCurrentTreePanel().setUpUrtFactors();
+            // _mainpanel.getCurrentTreePanel().setUpUrtFactor();
         }
     }
 
@@ -2477,4 +2480,8 @@ final class ControlPanel extends JPanel implements ActionListener {
         }
         return label;
     }
+
+    public JCheckBox getUseBranchWidthsCb() {
+        return _width_branches;
+    }
 }