private JCheckBox _color_acc_species;
private JCheckBox _color_according_to_annotation;
private boolean _color_branches;
- private JCheckBox _color_branches_cb;
+ private JCheckBox _use_visual_styles_cb;
private int _color_subtree_cb_item;
+ private int _change_node_font_item;
// The settings from the conf file
private final Configuration _configuration;
private int _copy_subtree_item;
private int _open_pdb_item;
private int _open_seq_web_item;
private int _open_tax_web_item;
+ private int _color_node_font_item;
private JButton _order;
private boolean _order_of_appearance;
private int _paste_subtree_item;
return _color_acc_species;
}
- public JCheckBox getColorBranchesCb() {
- return _color_branches_cb;
+ public JCheckBox getUseVisualStylesCb() {
+ return _use_visual_styles_cb;
}
public JCheckBox getDisplayAsPhylogramCb() {
addJCheckBox( getShowEventsCb(), ch_panel );
add( ch_panel );
break;
- case Configuration.color_branches:
- _color_branches_cb = new JCheckBox( title );
- getColorBranchesCb().setToolTipText( "To use branch color values, if present" );
- addJCheckBox( getColorBranchesCb(), ch_panel );
+ case Configuration.use_style:
+ _use_visual_styles_cb = new JCheckBox( title );
+ getUseVisualStylesCb().setToolTipText( "To use visual styles (colors, fonts), if present" );
+ addJCheckBox( getUseVisualStylesCb(), ch_panel );
add( ch_panel );
break;
case Configuration.width_branches:
return ( ( _color_acc_species != null ) && _color_acc_species.isSelected() );
}
- boolean isColorBranches() {
- return ( ( ( getColorBranchesCb() != null ) && getColorBranchesCb().isSelected() ) || ( ( getColorBranchesCb() == null ) && _color_branches ) );
+ boolean isUseVisualStyles() {
+ return ( ( ( getUseVisualStylesCb() != null ) && getUseVisualStylesCb().isSelected() ) || ( ( getUseVisualStylesCb() == null ) && _color_branches ) );
}
boolean isDrawPhylogram() {
getShowEventsCb().setSelected( state );
}
break;
- case Configuration.color_branches:
- if ( getColorBranchesCb() != null ) {
- getColorBranchesCb().setSelected( state );
+ case Configuration.use_style:
+ if ( getUseVisualStylesCb() != null ) {
+ getUseVisualStylesCb().setSelected( state );
}
break;
case Configuration.width_branches:
else if ( action == _open_pdb_item ) {
setActionWhenNodeClicked( NodeClickAction.OPEN_PDB_WEB );
}
+ else if ( action == _color_node_font_item ) {
+ setActionWhenNodeClicked( NodeClickAction.COLOR_NODE_FONT );
+ }
+ else if ( action == _change_node_font_item ) {
+ setActionWhenNodeClicked( NodeClickAction.CHANGE_NODE_FONT );
+ }
else {
throw new RuntimeException( "unknown action: " + action );
}
}
cb_index++;
}
+ if ( _configuration.doDisplayClickToOption( Configuration.color_node_font ) ) {
+ _color_node_font_item = cb_index;
+ addClickToOption( Configuration.color_node_font,
+ _configuration.getClickToTitle( Configuration.color_node_font ) );
+ if ( default_option == Configuration.color_node_font ) {
+ selected_index = cb_index;
+ }
+ cb_index++;
+ }
+ if ( _configuration.doDisplayClickToOption( Configuration.change_node_font ) ) {
+ _change_node_font_item = cb_index;
+ addClickToOption( Configuration.change_node_font,
+ _configuration.getClickToTitle( Configuration.change_node_font ) );
+ if ( default_option == Configuration.change_node_font ) {
+ selected_index = cb_index;
+ }
+ cb_index++;
+ }
if ( _configuration.doDisplayClickToOption( Configuration.open_seq_web ) ) {
_open_seq_web_item = cb_index;
addClickToOption( Configuration.open_seq_web, _configuration.getClickToTitle( Configuration.open_seq_web ) );
setCheckbox( Configuration.color_according_to_annotation,
_configuration.doCheckOption( Configuration.color_according_to_annotation ) );
}
- if ( _configuration.doDisplayOption( Configuration.color_branches ) ) {
- addCheckbox( Configuration.color_branches, _configuration.getDisplayTitle( Configuration.color_branches ) );
- setCheckbox( Configuration.color_branches, _configuration.doCheckOption( Configuration.color_branches ) );
+ if ( _configuration.doDisplayOption( Configuration.use_style ) ) {
+ addCheckbox( Configuration.use_style, _configuration.getDisplayTitle( Configuration.use_style ) );
+ setCheckbox( Configuration.use_style, _configuration.doCheckOption( Configuration.use_style ) );
}
if ( _configuration.doDisplayOption( Configuration.width_branches ) ) {
addCheckbox( Configuration.width_branches, _configuration.getDisplayTitle( Configuration.width_branches ) );
SHOW_DATA,
SORT_DESCENDENTS,
SUBTREE,
- SWAP;
+ SWAP,
+ CHANGE_NODE_FONT,
+ COLOR_NODE_FONT;
}
}