import org.forester.archaeopteryx.AptxUtil;
import org.forester.archaeopteryx.MainFrameApplication;
import org.forester.evoinference.distance.PairwiseDistanceCalculator.PWD_DISTANCE_METHOD;
-import org.forester.sequence.Sequence;
+import org.forester.sequence.MolecularSequence;
import org.forester.util.BasicDescriptiveStatistics;
import org.forester.util.DescriptiveStatistics;
}
}
- DescriptiveStatistics calcSequenceStats( final List<Sequence> seqs ) {
+ DescriptiveStatistics calcSequenceStats( final List<MolecularSequence> seqs ) {
final DescriptiveStatistics stats = new BasicDescriptiveStatistics();
- for( final Sequence s : seqs ) {
+ for( final MolecularSequence s : seqs ) {
stats.addValue( s.getLength() );
}
return stats;