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[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
archaeopteryx
/
tools
/
PhylogeneticInferrer.java
diff --git
a/forester/java/src/org/forester/archaeopteryx/tools/PhylogeneticInferrer.java
b/forester/java/src/org/forester/archaeopteryx/tools/PhylogeneticInferrer.java
index
f972745
..
8b89646
100644
(file)
--- a/
forester/java/src/org/forester/archaeopteryx/tools/PhylogeneticInferrer.java
+++ b/
forester/java/src/org/forester/archaeopteryx/tools/PhylogeneticInferrer.java
@@
-144,6
+144,7
@@
public class PhylogeneticInferrer extends RunnableProcess {
}
final NeighborJoiningF nj = NeighborJoiningF.createInstance( false, 5 );
final Phylogeny phy = nj.execute( m );
+ PhylogenyMethods.addMolecularSeqsToTree( phy, msa );
PhylogenyMethods.extractFastaInformation( phy );
return phy;
}