// Copyright (C) 2008-2009 Christian M. Zmasek
// Copyright (C) 2008-2009 Burnham Institute for Medical Research
// All rights reserved
-//
+//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
-//
+//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
else if ( type.toLowerCase().equals( POSITIVELY_REGULATES_STR ) ) {
_type = Type.POSITIVELY_REGULATES;
}
+ else if ( type.toLowerCase().equals( HAS_PART_STR ) ) {
+ _type = Type.HAS_PART;
+ }
else {
throw new IllegalArgumentException( "unknown GO relationship type: " + type );
}
_go_id = go_id;
}
+ @Override
public int compareTo( final GoRelationship rel ) {
return getGoId().compareTo( rel.getGoId() );
}
}
}
+ @Override
public GoId getGoId() {
return _go_id;
}
+ @Override
public Type getType() {
return _type;
}
case REGULATES:
sb.append( REGULATES_STR );
break;
+ case HAS_PART:
+ sb.append( HAS_PART_STR );
+ break;
default:
- new AssertionError( "unknown type: " + getType() );
+ new IllegalStateException( "unknown type: " + getType() );
}
sb.append( ": " );
sb.append( getGoId().toString() );