// Copyright (C) 2008-2009 Christian M. Zmasek
// Copyright (C) 2008-2009 Burnham Institute for Medical Research
// All rights reserved
-//
+//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
-//
+//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
public interface GoSubset extends Comparable<GoSubset> {
- public static final String GOSLIM_GENERIC_STR = "goslim_generic";
- public static final String GOSLIM_GOA_STR = "goslim_goa";
- public static final String GOSLIM_PIR_STR = "goslim_pir";
- public static final String GOSUBSET_PROK_STR = "gosubset_prok";
- public static final String GOSLIM_CANDIDA_STR = "goslim_candida";
- public static final String GOSLIM_PLANT_STR = "goslim_plant";
- public static final String GOSLIM_YEAST_STR = "goslim_yeast";
- public static final String GOSLIM_POMBE_STR = "goslim_pombe";
+ public static final String GOSLIM_GENERIC_STR = "goslim_generic";
+ public static final String GOSLIM_GOA_STR = "goslim_goa";
+ public static final String GOSLIM_PIR_STR = "goslim_pir";
+ public static final String GOSUBSET_PROK_STR = "gosubset_prok";
+ public static final String GOSLIM_CANDIDA_STR = "goslim_candida";
+ public static final String GOSLIM_ASPERGILLUS_STR = "goslim_aspergillus";
+ public static final String GOSLIM_PLANT_STR = "goslim_plant";
+ public static final String GOSLIM_YEAST_STR = "goslim_yeast";
+ public static final String GOSLIM_POMBE_STR = "goslim_pombe";
+ public static final String HIGH_LEVEL_ANNOTATION_QC_STR = "high_level_annotation_qc";
+ public static final String UNVETTED_STR = "unvetted";
+ public static final String MF_NEEDS_REVIEW_STR = "mf_needs_review";
public Type getType();
public static enum Type {
- GOSLIM_GENERIC, GOSLIM_GOA, GOSLIM_PIR, GOSUBSET_PROK, GOSLIM_CANDIDA, GOSLIM_PLANT, GOSLIM_YEAST, GOSLIM_POMBE;
+ GOSLIM_GENERIC,
+ GOSLIM_GOA,
+ GOSLIM_PIR,
+ GOSUBSET_PROK,
+ GOSLIM_CANDIDA,
+ GOSLIM_ASPERGILLUS,
+ GOSLIM_PLANT,
+ GOSLIM_YEAST,
+ GOSLIM_POMBE,
+ HIGH_LEVEL_ANNOTATION_QC,
+ UNVETTED,
+ MF_NEEDS_REVIEW;
}
}