// Copyright (C) 2008-2009 Christian M. Zmasek
// Copyright (C) 2008-2009 Burnham Institute for Medical Research
// All rights reserved
-//
+//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
-//
+//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
w.write( ForesterUtil.LINE_SEPARATOR );
w.write( "a.new_type:link { font-size: 7pt; color : #505050; text-decoration : none; }" );
w.write( ForesterUtil.LINE_SEPARATOR );
- w
- .write( "a.new_type:hover { font-size: 7pt; color : #000000; background-color : #FFFF00; text-decoration : none; }" );
+ w.write( "a.new_type:hover { font-size: 7pt; color : #000000; background-color : #FFFF00; text-decoration : none; }" );
w.write( ForesterUtil.LINE_SEPARATOR );
- w
- .write( "a.new_type:hover { font-size: 7pt; color : #000000; background-color : #FFFF00; text-decoration : none; }" );
+ w.write( "a.new_type:hover { font-size: 7pt; color : #000000; background-color : #FFFF00; text-decoration : none; }" );
w.write( ForesterUtil.LINE_SEPARATOR );
w.write( "td { text-align: left; vertical-align: top; font-family: Verdana, Arial, Helvetica; font-size: 8pt}" );
w.write( ForesterUtil.LINE_SEPARATOR );
- w
- .write( "th { text-align: left; vertical-align: top; font-family: Verdana, Arial, Helvetica; font-size: 10pt; font-weight: bold }" );
+ w.write( "th { text-align: left; vertical-align: top; font-family: Verdana, Arial, Helvetica; font-size: 10pt; font-weight: bold }" );
w.write( ForesterUtil.LINE_SEPARATOR );
w.write( "h1 { color : #000000; font-family: Verdana, Arial, Helvetica; font-size: 18pt; font-weight: bold }" );
w.write( ForesterUtil.LINE_SEPARATOR );
w.write( "h2 { color : #000000; font-family: Verdana, Arial, Helvetica; font-size: 16pt; font-weight: bold }" );
- w
- .write( "h3 { margin-top: 12px; margin-bottom: 0px; color : #000000; font-family: Verdana, Arial, Helvetica; font-size: 12pt; font-weight: bold }" );
+ w.write( "h3 { margin-top: 12px; margin-bottom: 0px; color : #000000; font-family: Verdana, Arial, Helvetica; font-size: 12pt; font-weight: bold }" );
w.write( ForesterUtil.LINE_SEPARATOR );
w.write( "</style>" );
w.write( ForesterUtil.LINE_SEPARATOR );
writer.write( String.valueOf( ontologizer_result.getStudyTerm() ) );
writer.write( "</td><td>" );
if ( domains_per_species != null ) {
- final StringBuilder sb = obtainDomainsForGoId( pfam_to_go, domains_per_species, go_id_to_terms, go_term
- .getGoId(), domain_ids_with_go_annot );
+ final StringBuilder sb = obtainDomainsForGoId( pfam_to_go,
+ domains_per_species,
+ go_id_to_terms,
+ go_term.getGoId(),
+ domain_ids_with_go_annot );
writer.write( sb.toString() );
}
else {