// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
//
// Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
package org.forester.io.parsers;
private static final Pattern NAME_SEQ_PATTERN = Pattern.compile( "(\\S+)\\s+(\\S+)\\s*" );
private static final Pattern INDENTED_SEQ_PATTERN = Pattern.compile( "\\s+(\\S+)\\s*" );
private static final Pattern NON_INDENTED_SEQ_PATTERN = Pattern.compile( "(\\S+).*" );
- private static final Pattern PROBCONS_REGEX = Pattern.compile( "^CLUSTAL\\s" );
+ private static final Pattern PROBCONS_REGEX = Pattern.compile( "^CLUSTAL" );
private static final Pattern MUSCLE_REGEX = Pattern.compile( "^MUSCLE\\s\\(" );
private static final Pattern CLUSTAL_REGEX = Pattern.compile( "^PROBCONS\\s" );
private static final Pattern ANYTHING_REGEX = Pattern.compile( "[\\d\\s]+" );