further reduction of NHX fields
[jalview.git] / forester / java / src / org / forester / io / parsers / nhx / NHXtags.java
index 3a524bb..7cf98e6 100644 (file)
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.io.parsers.nhx;
 
 public final class NHXtags {
 
-    public static final String CUSTOM_DATA_ON_NODE = "XN=";
-    public static final String COLOR               = "C=";
-    public static final String PARENT_BRANCH_WIDTH = "W=";
-    public static final String SUBTREE_NEIGHBORS   = "SNn=";
-    public static final String SUPER_ORTHOLOGOUS   = "SOn=";
-    public static final String ORTHOLOGOUS         = "On=";
-    public static final String TAXONOMY_ID         = "T=";
-    public static final String SUPPORT             = "B=";
-    public static final String IS_DUPLICATION      = "D=";
-    public static final String ANNOTATION          = "AN=";
-    public static final String SPECIES_NAME        = "S=";
-    public static final String DOMAIN_STRUCTURE    = "DS=";
-    public static final String GENE_NAME           = "GN=";
-    public static final String GENE_NAME_SYNONYM   = "G=";
-    public static final String SEQUENCE_ACCESSION  = "AC=";
-    public static final String NODE_IDENTIFIER     = "ID=";
-    public static final Object BRANCH_WIDTH        = "W=";
+    public static final String TAXONOMY_ID        = "T=";
+    public static final String SUPPORT            = "B=";
+    public static final String IS_DUPLICATION     = "D=";
+    public static final String SPECIES_NAME       = "S=";
+    public static final String DOMAIN_STRUCTURE   = "DS=";
+    public static final String GENE_NAME          = "GN=";
+    public static final String SEQUENCE_ACCESSION = "AC=";
 }