moved to: https://sites.google.com/site/cmzmasek/home/software/forester
[jalview.git] / forester / java / src / org / forester / io / parsers / phyloxml / PhyloXmlUtil.java
index 9ccfdf9..f7aa962 100644 (file)
@@ -21,7 +21,7 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.io.parsers.phyloxml;
 
@@ -31,13 +31,14 @@ import java.util.List;
 import java.util.Set;
 import java.util.regex.Pattern;
 
+import org.forester.io.parsers.util.ParserUtils;
+
 public final class PhyloXmlUtil {
 
     public static final String       OTHER                                      = "other";
     public static final String       UNKNOWN                                    = "unknown";
     public final static Pattern      SEQUENCE_SYMBOL_PATTERN                    = Pattern.compile( "\\S{1,20}" );
-    public final static Pattern      TAXOMONY_CODE_PATTERN                      = Pattern
-                                                                                        .compile( "[a-zA-Z0-9_]{1,10}" );
+    public final static Pattern      TAXOMONY_CODE_PATTERN                      = ParserUtils.TAXOMONY_CODE_PATTERN_1;
     public final static Pattern      LIT_REF_DOI_PATTERN                        = Pattern
                                                                                         .compile( "[a-zA-Z0-9_\\.]+\\S+" );
     public final static Set<String>  SEQUENCE_TYPES                             = new HashSet<String>();