removed lineage

[jalview.git] / forester / java / src / org / forester / io / parsers / phyloxml / data / TaxonomyParser.java

diff --git a/forester/java/src/org/forester/io/parsers/phyloxml/data/TaxonomyParser.java b/forester/java/src/org/forester/io/parsers/phyloxml/data/TaxonomyParser.java
index 879cd5a..d226801 100644 (file)
--- a/forester/java/src/org/forester/io/parsers/phyloxml/data/TaxonomyParser.java
+++ b/forester/java/src/org/forester/io/parsers/phyloxml/data/TaxonomyParser.java
@@ -21,13 +21,15 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.io.parsers.phyloxml.data;
 
+import java.util.Arrays;
+
+import org.forester.io.parsers.phyloxml.PhyloXmlDataFormatException;
 import org.forester.io.parsers.phyloxml.PhyloXmlMapping;
 import org.forester.io.parsers.phyloxml.XmlElement;
-import org.forester.io.parsers.util.PhylogenyParserException;
 import org.forester.phylogeny.data.Identifier;
 import org.forester.phylogeny.data.Taxonomy;
 import org.forester.phylogeny.data.Uri;
@@ -48,7 +50,7 @@ public class TaxonomyParser implements PhylogenyDataPhyloXmlParser {
     }
 
     @Override
-    public Taxonomy parse( final XmlElement element ) throws PhylogenyParserException {
+    public Taxonomy parse( final XmlElement element ) throws PhyloXmlDataFormatException {
         final Taxonomy taxonomy = new Taxonomy();
         for( int i = 0; i < element.getNumberOfChildElements(); ++i ) {
             final XmlElement child_element = element.getChildElement( i );