public interface Msa {
+ public static enum MSA_FORMAT {
+ FASTA, PHYLIP;
+ }
+
public String getIdentifier( int row );
public void setIdentifier( int row, String identifier );
public void setResidueAt( final int row, final int col, final char residue );
- public void write( Writer w ) throws IOException;
+ public void write( Writer w, MSA_FORMAT format ) throws IOException;
}