// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
//
// Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
package org.forester.msa;
import java.io.IOException;
import java.util.List;
+import org.forester.sequence.Sequence;
import org.forester.util.SystemCommandExecutor;
public abstract class MsaInferrer {
}
public abstract Msa infer( File path_to_input_seqs, List<String> opts ) throws IOException, InterruptedException;
+
+ public abstract Msa infer( final List<Sequence> seqs, final List<String> opts ) throws IOException,
+ InterruptedException;
}