JAL-2805 made needed color set methods public

[jalview.git] / forester / java / src / org / forester / pccx / ExternalNodeBasedCoverageMethod.java

diff --git a/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethod.java b/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethod.java
index a88018f..76b3134 100644 (file)
--- a/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethod.java
+++ b/forester/java/src/org/forester/pccx/ExternalNodeBasedCoverageMethod.java
@@ -22,7 +22,7 @@
 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
 //
 // Contact: phylosoft @ gmail . com
-// WWW: www.phylosoft.org/forester
+// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
 
 package org.forester.pccx;
 
@@ -120,13 +120,13 @@ public class ExternalNodeBasedCoverageMethod implements CoverageCalculationMetho
             final PhylogenyNode node = ( PhylogenyNode ) element.getKey();
             final double normalized_value = ( Double ) element.getValue() * normalization_factor;
             PhylogenyMethods.setBranchColorValue( node, ForesterUtil
-                    .calcColor( normalized_value,
-                                min,
-                                max,
-                                median,
-                                ExternalNodeBasedCoverageMethod.MINIMAL_COV_COLOR,
-                                ExternalNodeBasedCoverageMethod.MAXIMAL_COV_COLOR,
-                                ExternalNodeBasedCoverageMethod.MEAN_COVERAGE_COLOR ) );
+                                                  .calcColor( normalized_value,
+                                                              min,
+                                                              max,
+                                                              median,
+                                                              ExternalNodeBasedCoverageMethod.MINIMAL_COV_COLOR,
+                                                              ExternalNodeBasedCoverageMethod.MAXIMAL_COV_COLOR,
+                                                              ExternalNodeBasedCoverageMethod.MEAN_COVERAGE_COLOR ) );
         }
         PhylogenyMethods.postorderBranchColorAveragingExternalNodeBased( phylogeny );
     }