in progress

[jalview.git] / forester / java / src / org / forester / phylogeny / PhylogenyNode.java

diff --git a/forester/java/src/org/forester/phylogeny/PhylogenyNode.java b/forester/java/src/org/forester/phylogeny/PhylogenyNode.java
index 2b7c2cf..6b180ca 100644 (file)
--- a/forester/java/src/org/forester/phylogeny/PhylogenyNode.java
+++ b/forester/java/src/org/forester/phylogeny/PhylogenyNode.java
@@ -74,6 +74,15 @@ public final class PhylogenyNode implements Comparable<PhylogenyNode> {
         setSumExtNodes( 1 ); // For ext node, this number is 1 (not 0!!)
     }
 
+    public PhylogenyNode( final String node_name ) {
+        setId( PhylogenyNode.getNodeCount() );
+        PhylogenyNode.increaseNodeCount();
+        setSumExtNodes( 1 ); // For ext node, this number is 1 (not 0!!)
+        if ( node_name != null ) {
+            getNodeData().setNodeName( node_name );
+        }
+    }
+
     private PhylogenyNode( final String nhx,
                            final NHXParser.TAXONOMY_EXTRACTION taxonomy_extraction,
                            final boolean replace_underscores ) throws NHXFormatException, PhyloXmlDataFormatException {