// Copyright (C) 2008-2009 Christian M. Zmasek
// Copyright (C) 2008-2009 Burnham Institute for Medical Research
// All rights reserved
-//
+//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
-//
+//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
setType( type );
}
+ @Override
public StringBuffer asSimpleText() {
return new StringBuffer().append( ForesterUtil.FORMATTER_6.format( getValue() ) );
}
+ @Override
public StringBuffer asText() {
final StringBuffer sb = new StringBuffer();
if ( !ForesterUtil.isEmpty( getType() ) ) {
return getType().compareToIgnoreCase( confidence.getType() );
}
+ @Override
public PhylogenyData copy() {
return new Confidence( getValue(), getType() );
}
setType( "" );
}
+ @Override
public boolean isEqual( final PhylogenyData confidence ) {
if ( confidence == null ) {
return false;
_value = value;
}
+ @Override
public StringBuffer toNHX() {
final StringBuffer sb = new StringBuffer();
sb.append( NHXtags.SUPPORT );
return sb;
}
+ @Override
public void toPhyloXML( final Writer writer, final int level, final String indentation ) throws IOException {
if ( getValue() == CONFIDENCE_DEFAULT_VALUE ) {
return;