in progress (special coloring is still true)

[jalview.git] / forester / java / src / org / forester / protein / Domain.java

diff --git a/forester/java/src/org/forester/protein/Domain.java b/forester/java/src/org/forester/protein/Domain.java
index 3ede985..b1f720a 100644 (file)
--- a/forester/java/src/org/forester/protein/Domain.java
+++ b/forester/java/src/org/forester/protein/Domain.java
@@ -26,32 +26,20 @@
 
 package org.forester.protein;
 
-import org.forester.go.GoId;
-
 public interface Domain extends Comparable<Domain> {
 
-    public void addGoId( GoId go_id );
-
-    public DomainId getDomainId();
+    public String getDomainId();
 
     public int getLength();
 
     public int getFrom();
 
-    public GoId getGoId( int i );
-
     public short getNumber();
 
-    public int getNumberOfGoIds();
-
     public double getPerDomainEvalue();
 
     public double getPerDomainScore();
 
-    public double getPerSequenceEvalue();
-
-    public double getPerSequenceScore();
-
     public int getTo();
 
     public short getTotalCount();