JAL-2844 partitioning code made slightly clearer

[jalview.git] / forester / java / src / org / forester / protein / Domain.java

diff --git a/forester/java/src/org/forester/protein/Domain.java b/forester/java/src/org/forester/protein/Domain.java
index a4ab80e..dcc41fb 100644 (file)
--- a/forester/java/src/org/forester/protein/Domain.java
+++ b/forester/java/src/org/forester/protein/Domain.java
@@ -28,26 +28,25 @@ package org.forester.protein;
 
 public interface Domain extends Comparable<Domain> {
 
-    // ^^  public void addGoId( GoId go_id );
     public String getDomainId();
 
     public int getLength();
 
     public int getFrom();
 
-    // ^^   public GoId getGoId( int i );
     public short getNumber();
 
-    // ^^  public int getNumberOfGoIds();
     public double getPerDomainEvalue();
 
     public double getPerDomainScore();
 
-    public double getPerSequenceEvalue();
-
-    public double getPerSequenceScore();
-
     public int getTo();
 
     public short getTotalCount();
+
+    short getHmmLen();
+
+    short getHmmFrom();
+
+    short getHmmTo();
 }
\ No newline at end of file