phylotastic hackathon at NESCENT 120608
[jalview.git] / forester / java / src / org / forester / surfacing / TestSurfacing.java
index 8d4186c..44c9115 100644 (file)
@@ -48,6 +48,7 @@ import org.forester.phylogeny.Phylogeny;
 import org.forester.phylogeny.PhylogenyNode;
 import org.forester.phylogeny.factories.ParserBasedPhylogenyFactory;
 import org.forester.phylogeny.factories.PhylogenyFactory;
+import org.forester.protein.BasicDomain;
 import org.forester.protein.BasicProtein;
 import org.forester.protein.BinaryDomainCombination;
 import org.forester.protein.BinaryDomainCombination.DomainCombinationType;
@@ -4108,7 +4109,9 @@ public class TestSurfacing {
                                      true,
                                      new BasicSpecies( "human" ),
                                      null,
-                                     DomainCombinationType.BASIC );
+                                     DomainCombinationType.BASIC,
+                                     null,
+                                     null );
             cd = cdcc2.get( new DomainId( "A" ) );
             if ( cd.getKeyDomainCount() != 9 ) {
                 return false;