in progress...

[jalview.git] / forester / java / src / org / forester / util / ForesterUtil.java

diff --git a/forester/java/src/org/forester/util/ForesterUtil.java b/forester/java/src/org/forester/util/ForesterUtil.java
index 48d973b..190f84d 100644 (file)
--- a/forester/java/src/org/forester/util/ForesterUtil.java
+++ b/forester/java/src/org/forester/util/ForesterUtil.java
@@ -865,6 +865,21 @@ public final class ForesterUtil {
             else if ( tax_group.equals( TaxonomyGroups.BACTERIA ) ) {
                 return TaxonomyColors.BACTERIA_COLOR;
             }
+            else if ( tax_group.equals( TaxonomyGroups.VIRUSES ) ) {
+                return TaxonomyColors.VIRUSES_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.ALPHAHERPESVIRINAE ) ) {
+                return TaxonomyColors.ALPHAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.BETAHERPESVIRINAE ) ) {
+                return TaxonomyColors.BETAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.GAMMAHERPESVIRINAE ) ) {
+                return TaxonomyColors.GAMMAHERPESVIRINAE_COLOR;
+            }
+            else if ( tax_group.equals( TaxonomyGroups.OTHER ) ) {
+                return TaxonomyColors.OTHER_COLOR;
+            }
         }
         return null;
     }
@@ -945,6 +960,21 @@ public final class ForesterUtil {
         else if ( tax.equalsIgnoreCase( TaxonomyGroups.BACTERIA ) ) {
             return TaxonomyGroups.BACTERIA;
         }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.BACTERIA ) ) {
+            return TaxonomyGroups.BACTERIA;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.VIRUSES ) ) {
+            return TaxonomyGroups.VIRUSES;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.ALPHAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.ALPHAHERPESVIRINAE;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.BETAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.BETAHERPESVIRINAE ;
+        }
+        else if ( tax.equalsIgnoreCase( TaxonomyGroups.GAMMAHERPESVIRINAE ) ) {
+            return TaxonomyGroups.GAMMAHERPESVIRINAE;
+        }
         return null;
     }