v 1.04

[jalview.git] / forester / ruby / evoruby / exe / test.rb

diff --git a/forester/ruby/evoruby/exe/test.rb b/forester/ruby/evoruby/exe/test.rb
index 8a4431d..24c3185 100755 (executable)
--- a/forester/ruby/evoruby/exe/test.rb
+++ b/forester/ruby/evoruby/exe/test.rb
@@ -25,9 +25,9 @@ require 'lib/evo/io/writer/fasta_writer'
 require 'lib/evo/io/parser/fasta_parser'
 require 'lib/evo/io/parser/ncbi_tseq_parser'
 require 'lib/evo/io/parser/hmmsearch_domain_extractor'
-require 'lib/evo/apps/domain_sequence_extractor'
-require 'lib/evo/apps/hmmscan_parser'
-require 'lib/evo/apps/domains_to_forester'
+require 'lib/evo/tool/domain_sequence_extractor'
+require 'lib/evo/tool/hmmscan_summary'
+require 'lib/evo/tool/domains_to_forester'
 require 'lib/evo/io/parser/general_msa_parser'
 require 'lib/evo/io/parser/basic_table_parser'
 require 'lib/evo/util/command_line_arguments'
@@ -823,7 +823,7 @@ module Evoruby
 
         def test_hmmscan_parser()
             begin
-                h = Evoruby::HmmscanParser.new()
+                h = Evoruby::HmmscanSummary.new()
             rescue Exception => e
                 puts()
                 puts( e.to_s )