inprogress

[jalview.git] / forester / ruby / evoruby / lib / evo / tool / multi_sequence_extractor.rb

diff --git a/forester/ruby/evoruby/lib/evo/tool/multi_sequence_extractor.rb b/forester/ruby/evoruby/lib/evo/tool/multi_sequence_extractor.rb
index f6365d8..0c525ad 100644 (file)
--- a/forester/ruby/evoruby/lib/evo/tool/multi_sequence_extractor.rb
+++ b/forester/ruby/evoruby/lib/evo/tool/multi_sequence_extractor.rb
@@ -301,7 +301,7 @@ module Evoruby
 
             indices = current_msa.find_by_name_start( seq_name, true )
             if indices.size == 1
-              seq =  current_msa.get_sequence( indices[ 0 ] )
+              seq = current_msa.get_sequence( indices[ 0 ] )
             elsif indices.size == 0
               # Not found, try finding by partial match.
               begin
@@ -536,7 +536,7 @@ module Evoruby
       rescue Exception => e
         Util.fatal_error( PRG_NAME, "error: " + e.to_s )
       end
-      if @seqs <= 600000
+      if @seqs <= 400000
         @file_to_msa[ input ] = msa
         @seqs += msa.get_number_of_seqs
         puts "   total seqs in memory: " + @seqs.to_s