compactor work

[jalview.git] / forester / ruby / scripts / g.rb

diff --git a/forester/ruby/scripts/g.rb b/forester/ruby/scripts/g.rb
index 6d1adf4..c8e367b 100644 (file)
--- a/forester/ruby/scripts/g.rb
+++ b/forester/ruby/scripts/g.rb
@@ -1,6 +1,6 @@
-File.open( "g" ) do | file |
+File.open( "g.txt" ) do | file |
   while line = file.gets
-    if line =~ /^(\S{3,5})\s+\S{3,5}/
+    if line =~ /^([A-Z0-9]{3,5})/
       puts "/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/" + $1 + ".hmmscan    " + $1
     else
       puts line