selecting "Find..." from the "Search" menu.</p>
<img src="search.png" width="400" height="152">
<p>"Find next" will find the next occurrence of the
- specified and adjust the alignment window view to show it, and
- "Find all" highlights all matches for a pattern. The
+ query and adjust the alignment window view to show it, and
+ "Find all" highlights all matches for a query. The
"New Feature" is a quick way to highlight and group
residues matching the specified search pattern throughout the
alignment.
<li>Gaps are ignored when matching the query to the sequences
in the alignment.</li>
<li>Hidden columns can optionally be ignored (<em>since Jalview 2.11</em>)</li>
- <li>The search is applied to both sequences and their IDs, and
- optionally also to the description string (<em>since Jalview
- 2.10</em>)
+ <li>The search is applied to both sequences and their IDs. It can
+ optionally also be applied to the description string (<em>since Jalview
+ 2.10</em>), and sequence feature descriptions (<em>since Jalview 2.11.2.5</em>).
</li>
<li>If a region is selected, then search will <strong>only</strong>
be performed on that region.<br />
highlighted region.
</p>
<p>
+ <strong>Copying highlighted regions to a new alignment</strong>
+ </p>
+ <p>
+ You can copy the currently highlighted matching regions of sequences to the clipboard with alt-Command-C.
+ </p>
+ <p>
<strong>A quick Regular Expression Guide</strong>
</p>