JAL-3111 release notes for JAL-3330 JAL-3021 (tweak) and JAL-3333
[jalview.git] / help / help / html / releases.html
index b64c24c..d6ebd1b 100755 (executable)
@@ -101,7 +101,7 @@ li:before {
             implementation that allows updates) used for Sequence Feature collections</li>
           <li>
                                                        <li>
-                                                               <!-- JAL-2808,JAL-2069 -->Sequence features can be filtered and
+                                                               <!-- JAL-2808,JAL-2069,JAL-2820 -->Sequence features can be filtered and
                                                                shaded according to any associated attributes (e.g. variant
                                                                attributes from VCF file, or key-value pairs imported from
                                                                column 9 of GFF file)
@@ -111,8 +111,8 @@ li:before {
                                                                recognise variant features
                                                        </li>
                                                        <li>
-                                                               <!-- JAL-2897 -->Show synonymous codon variants on peptide
-                                                               sequences
+                                                               <!-- JAL-2897,JAL-3330 -->Show synonymous codon variants on peptide
+                                                               sequences (also coloured red by default)
                                                        </li>
                                                        <li>
                                                                <!-- JAL-2792 -->Popup window to show full report for a selected sequence feature's
@@ -330,8 +330,8 @@ li:before {
                                                red in original view
                                        </li>
           <li>
-            <!-- JAL-2898 -->stop_gained variants not shown correctly on
-            peptide sequence
+            <!-- JAL-2898,JAL-2207 -->stop_gained variants not shown correctly on
+            peptide sequence (computed variant shown as p.Res.null)
           </li>
                                        <li>
                                                <!-- JAL-2060 -->'Graduated colour' option not offered for
@@ -422,12 +422,15 @@ li:before {
                                                without normalisation
                                        </li>
                                        <li>
-                                               <!-- JAL-3021 -->Sequence Details report opens positioned to top
+                                               <!-- JAL-3021 -->Sequence Details report should open positioned at top
                                                of report
                                        </li>
                                        <li>
                                                <!-- JAL-914 -->Help page can be opened twice
                                        </li>
+                                 <li>
+                                 <!-- JAL-3333 -->Fuzzy text in web service status menu on OSX Mojave
+                                 </li>
                                </ul> <em>Editing</em>
                                <ul>
                                        <li>