Features now array
[jalview.git] / help / helpTOC.xml
index 6a8fe72..1530b05 100755 (executable)
@@ -2,10 +2,17 @@
 <!DOCTYPE toc PUBLIC "-//Sun Microsystems Inc.//DTD JavaHelp TOC Version 1.0//EN" "http://java.sun.com/products/javahelp/toc_1_0.dtd">\r
 <toc version="1.0">\r
 <tocitem text="Jalview Documentation" target="home" expand="true" >\r
-       <tocitem text="What's new" target="new" expand="false"/>\r
+       <tocitem text="What's new" target="new" expand="false">\r
+                <tocitem text="EBI Sequence Fetcher" target="seqfetch"/>\r
+                <tocitem text="New Output Format Controls" target="preferences"/>\r
+                <tocitem text="Enhanced PDB Viewer" target="viewingpdbs"/>\r
+                <tocitem text="Sequence Feature Styles" target="seqfeatures"/>\r
+        </tocitem>\r
+       <tocitem text="Release History" target="release"/>\r
        <tocitem text="Alignment Annotations" target ="alannotation"/>\r
        \r
        <tocitem text="Input / Output" target="io"/>\r
+       <tocitem text="Key Strokes" target="keys"/>\r
        <tocitem text="Making figures" target="export"/>\r
        <tocitem text="Editing Alignments" target ="edit"/>\r
        <tocitem text="Web Services" target="webservice" expand="false">\r
@@ -40,9 +47,8 @@
                <tocitem text="Desktop Window" target="desktopMenu"/>\r
                <tocitem text="Alignment Window" target="alMenu">\r
                 <tocitem text="File Menu" target="alwFile"/>\r
-                <tocitem text="Edit Menu" target="alwEdit"/>  \r
-                <tocitem text="Search Menu" target="search"/> \r
-                <tocitem text="View Menu" target="alwView"/>  \r
+                <tocitem text="Edit Menu" target="alwEdit"/> \r
+                <tocitem text="View Menu" target="alwView"/> \r
                 <tocitem text="Colour Menu" target="alwColour"/>\r
                 <tocitem text="Calculation Menu" target="alwCalc"/>\r
                                <tocitem text="Web Service Menu" target="wsMenu"/>\r
@@ -52,8 +58,9 @@
        </tocitem>\r
        <tocitem text="Memory Settings" target="memory"/>\r
 </tocitem>\r
-<tocitem text="Useful information" expand="false">\r
+<tocitem text="Useful information" expand="true">\r
        <tocitem text="Amino Acid Table" target="aminoAcids"/>\r
+       <tocitem text="Amino Acid Properties" target="aaProperties"/>\r
        <tocitem text="The Genetic Code" target="geneticCode"/>\r
 </tocitem>\r
 </toc>\r