JAL-1696 disabled editing of PDB Id field from settings
[jalview.git] / help / helpTOC.xml
index 4a32606..345cb51 100755 (executable)
@@ -1,6 +1,6 @@
 <?xml version="1.0" encoding="ISO-8859-1"  ?>
-<!-- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) * 
-       Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. 
+<!-- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * 
+       Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. 
        * * Jalview is free software: you can redistribute it and/or * modify it 
        under the terms of the GNU General Public License * as published by the Free 
        Software Foundation, either version 3 * of the License, or (at your option) 
@@ -90,6 +90,7 @@
                        <tocitem text="Tree/PCA Input Data" target="recoverInputdata" />
                        <tocitem text="Pairwise Alignments" target="pairwise" />
                        <tocitem text="Remove Redundancy" target="redundancy" />
+                       <tocitem text="Select Column by Annotation" target="calcs.annotation" />
                </tocitem>
                <tocitem text="Sequence Annotations" target="seqannots" expand="true">
                        <tocitem text="Annotation from Structure" target="xsspannotation" expand="false" />
                        </tocitem>
                </tocitem>
                <tocitem text="Preferences" target="preferences" />
-               <tocitem text="Memory Settings" target="memory" expand="false">
-                       <tocitem text="JNLP with extra memory parameters" target="jalviewjnlp" />
-               </tocitem>
+               <tocitem text="Memory Settings" target="memory" expand="false"/>
                <tocitem text="Command Line" target="commandline" expand="false">
                        <tocitem text="Command Line Arguments" target="clarguments" />
                        <tocitem text="Groovy Shell" target="groovy" />