updated documentation table of contents, menus and whats new for 2.7

[jalview.git] / help / helpTOC.xml

diff --git a/help/helpTOC.xml b/help/helpTOC.xml
index a1cf057..6da4490 100755 (executable)
--- a/help/helpTOC.xml
+++ b/help/helpTOC.xml
@@ -20,10 +20,12 @@
 <toc version="1.0">
 <tocitem text="Jalview Documentation" target="home" expand="true" >
        <tocitem text="What's new" target="new" expand="true">
-      <tocitem text="Jaba Web Services" target="jabaws"/>
       <tocitem text="Enhanced Jmol/Jalview interaction" target="pdbjmol"/>
           <tocitem text="Sequence Harmony Multi-Relief Analysis" target="shmrws"/>
-      <tocitem text="Default Colouring preferences" target=""/>
+          <tocitem text="Jalview News Reader" target="newsreader"/>
+          <tocitem text="Sort alignments associated with tree" target="treeviewer"/>
+      <tocitem text="Default Annotation preferences" target="colours.annotation"/>
+      <tocitem text="Jaba Web Services" target="jabaws"/>
        </tocitem>
     <tocitem text="Editing Alignments" target ="edit"/>        
     <tocitem text="Cursor Mode" target="cursor"/>