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- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
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* This file is part of Jalview.
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* modify it under the terms of the GNU General Public License
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+ * of the License, or (at your option) any later version.
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+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
<head>
<title>The Alignment Annotations File</title>
</head>
<em>SEQUENCE_REF</em> sequence reference statement, the sequence representative
for the group will be set to the referenced sequence.<!-- <br><strong>Note:</strong> if the <em>hide</em>
property is set then only the representative sequence for the group will be shown in the alignment.--></li>
+ <li>The interpretation of the COMBINE statement in <em>Version 2.8.1</em> was refined
+ so that only annotation line graphs with the given names ands the same
+ <strong>SEQUENCE_REF</strong> and <strong>GROUP_REF</strong> scope are grouped.</li>
</ul>
<p> </p>
<p>An example Annotation file is given below:
git://source.jalview.org / jalview.git / blobdiff