</ul>
</li>
<li><strong>Selecting Structures</strong><br />You can select
- the structures that you want to open and view by selecting them with
- the mouse and keyboard.<br />By default, if structures were
+ the structures that you want to open and view by selecting them
+ with the mouse and keyboard.<br />By default, if structures were
discovered, then some will already be selected according to the
criteria shown in the drop-down menu. The default criteria is
'highest resolution', simply choose another to pick structures in
dialog box.</li>
</ul></li>
<li><strong>To view selected structures, click the <strong>"View"</strong>
- button.</strong><br />
+ button.
+ </strong><br />
<ul>
<li>Additional structure data will be downloaded with the
EMBL-EBI's dbfetch service</li>
retrieved with this service are derived directly from the PDB 3D
structure data, which can be viewed in the same way above. Secondary
structure and temperature factor annotation can also be added. <br />
-
- <br>Jalview
- will also read PDB files directly - either in PDB format, or <a
- href="mmcif.html">mmCIF</a>. Simply load in the file as you would
- an alignment file. The sequences of any protein or nucleotide chains
- will be extracted from the file and viewed in the alignment window.
+
+ <br>Jalview will also read PDB files directly - either in PDB
+ format, or <a href="mmcif.html">mmCIF</a>. Simply load in the file
+ as you would an alignment file. The sequences of any protein or
+ nucleotide chains will be extracted from the file and viewed in the
+ alignment window.
</p>
<p>
Features"</strong> menu item and the <a href="featuresettings.html">Feature
Settings dialog box</a>.
</p>
- <br/>
+ <br />
<hr>
<p>
<strong>Switching between mmCIF and PDB format for