+++ /dev/null
-<html>
-<!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
- * Copyright (C) 2015 The Jalview Authors
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *
- * Jalview is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- * PURPOSE. See the GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- -->
-<head>
-<title>Jalview Documentation</title>
-</head>
-
-<body>
- <IMG src="Jalview_Logo.png">
- <p>
- <strong>Welcome to Jalview's built in documentation.</strong>
- </p>
- <p>Here are some good places to start:</p>
- <ul>
- <li><a href="whatsNew.html">What's New</a> summarises the new
- features in this release of Jalview.</li>
- <li>Learn how to <a href="editing/index.html">edit
- alignments</a> with Jalview.
- </li>
- <li><a href="features/seqfeatures.html">Import and display
- sequence features on your alignment</a></li>
- <li>Use <a href="features/viewingpdbs.html">Jmol to view
- and superpose 3D structures</a> associated with sequences in the
- alignment
- </li>
- </ul>
- <p>
- For more information, you might also want to take a look at the
- documentation section of the Jalview website (<a
- href="http://www-test.jalview.org/about/documentation">http://www.jalview.org/about/documentation</a>).
- </p>
- <p>
- If you are using the Jalview Desktop application and are looking for
- something specific, then try the search box (next to the print
- icon). If you're already viewing this in your web browser, then
- google the online version of these pages. If you don't find what you
- are looking for, or want to report a bug or make a feature request,
- then get in contact over at <a
- href="http://www.jalview.org/community">http://www.jalview.org/community</a>
- </p>
-
- <p>
- <strong>Citing Jalview</strong><br />If you use Jalview in your
- work, please cite the Jalview 2 paper in Bioinformatics:
- </p>
- <p>
- Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M., Barton,
- G.J (2009), <br> "Jalview version 2: A Multiple Sequence
- Alignment and Analysis Workbench,"<br> <em>Bioinformatics</em>
- <strong>25</strong> (9) 1189-1191 doi: 10.1093/bioinformatics/btp033
- </p>
- <p>
- <strong>The Jalview Authors</strong><br /> The following people
- have contributed to Jalview's development:
- <ul>
- <li>Jalview 1
- <ul>
- <li>Michele Clamp</li>
- <li>James Cuff</li>
- <li>Steve Searle</li>
- <li>David Martin</li>
- <li>Geoff Barton</li>
- </ul>
- </li>
- <li>Jalview 2
- <ul>
- <li>Jim Procter</li>
- <li>Andrew Waterhouse</li>
- <li>Mungo Carstairs</li>
- <li>Tochukwu 'Charles' Ofoegbu</li>
- <li>Jan Engelhardt</li>
- <li>Lauren Lui</li>
- <li>Anne Menard</li>
- <li>Natasha Sherstnev</li>
- <li>Daniel Barton</li>
- <li>David Roldan-Martinez</li>
- <li>David Martin</li>
- <li>Geoff Barton</li>
- </ul>
- </li>
- </ul>
- </p>
-</body>
-</html>
git://source.jalview.org / jalview.git / blobdiff