autoscroll option

[jalview.git] / help / html / menus / alignmentMenu.html

diff --git a/help/html/menus/alignmentMenu.html b/help/html/menus/alignmentMenu.html
index d2ca481..b368235 100755 (executable)
--- a/help/html/menus/alignmentMenu.html
+++ b/help/html/menus/alignmentMenu.html
@@ -214,6 +214,11 @@
                displayed below the alignment. The default setting is to display the
                conservation calculation, quality calculation and consensus values as
                bar charts. </em></li>
+                 <li><strong>Automatic Scrolling<br>
+    </strong><em>When selected, the view will automatically scroll to display the
+    highlighted sequence position corresponding to the position under the mouse 
+    pointer in a linked alignment or structure view.</em>
+               </li>
                <li><strong>Show Sequence Features</strong><br>
                <em>Show or hide sequence features on this alignment.</em></li>
                <li><strong><a href="../features/featuresettings.html">Seqence
@@ -221,6 +226,11 @@
                <em>Opens the Sequence Feature Settings dialog box to control the
                colour and display of sequence features on the alignment, and
                configure and retrieve features from DAS annotation servers.</em></li>
+               <li><strong>Sequence ID Tooltip</strong><em> (application only)
+    <br>This submenu's options allow the inclusion or exclusion of 
+    non-positional sequence features or database cross references 
+    from the tooltip shown when the mouse hovers over the sequence ID panel.</em></li> 
+               
                <li><strong><a href="../features/overview.html">Overview
                Window</a><br>
                </strong><em>A scaled version of the alignment will be displayed in a