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update release branch to v2.8
[jalview.git] / help / html / menus / alignmentMenu.html
diff --git a/help/html/menus/alignmentMenu.html b/help/html/menus/alignmentMenu.html
index 6a5ec9f..eb51c62 100755 (executable)
--- a/help/html/menus/alignmentMenu.html
+++ b/help/html/menus/alignmentMenu.html
@@ -1,7 +1,7 @@
 <html>
 <!--
  * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
  * 
  * This file is part of Jalview.
  * 
@@ -287,9 +287,13 @@
                                                <li><strong>Show Consensus Histogram<br> </strong><em>
                                                        Enable or disable the display of the histogram above the
                                                        consensus sequence.</em></li>
-                                               <li><strong>Show Consensus Profile<br> </strong><em> Enable
-                                                       or disable the display of the sequence logo above the consensus
+                                               <li><strong>Show Consensus Logo<br> </strong><em> Enable
+                                                       or disable the display of the Consensus Logo above the consensus
                                                        sequence.</em></li>
+                                               <li><strong>Normalise Consensus Logo<br>
+                                               </strong><em>When enabled, scales all logo stacks to the same height,
+                                                               making it easier to compare symbol diversity in highly variable
+                                                               regions.</em></li>
                                                <li><strong>Group Conservation<br> </strong><em> When
                                                        ticked, display a conservation row for all groups (only available
                                                        for protein alignments).</em></li>