<body>\r
<p><strong>Alignment Window File Menu</strong></p>\r
<ul>\r
- <li><strong>File</strong></li>\r
+ <li><strong>File</strong><br>\r
+ </li>\r
+ <li><strong>Fetch Sequence</strong><br>\r
+ <em>Shows a dialog window in which you can select known ids from Uniprot,\r
+ EMBL, EMBLCDS or PDB database using Web Services provided by the European\r
+ Bioinformatics Institute. See <a href="features/seqfetch.html">Sequence Fetcher</a>.</em></li>\r
</ul>\r
<ul>\r
<li><strong>Save As<br>\r
alignment background colours and group colours. If the alignment is <a\r
href="../features/wrap.html">wrapped</a>, the output will also\r
be wrapped and will have the same visible residue width as the\r
- open alignment. \r
+ open alignment.\r
</em>\r
<ul>\r
<li><strong>HTML<br>\r
- </strong><em>Create a <a href="../io/index.html#export">web page</a>\r
+ </strong><em>Create a <a href="../io/export.html">web page</a>\r
from your alignment.</em></li>\r
<li><strong>EPS<br>\r
- </strong><em>Create an <a href="../io/index.html#export">Encapsulated\r
+ </strong><em>Create an <a href="../io/export.html">Encapsulated\r
Postscript</a> file from your alignment.</em></li>\r
<li><strong>PNG<br>\r
- </strong><em>Create a <a href="../io/index.html#export">Portable Network\r
+ </strong><em>Create a <a href="../io/export.html">Portable Network\r
Graphics</a> file from your alignment.<br>\r
</em></li>\r
</ul>\r
alignment. Note: the ids of the tree file and your alignment\r
MUST be the same.<br>\r
</em></li>\r
+ <li><strong>Load Features / Annotations<br>\r
+ </strong><em>Load files describing precalculated <a href="../features/featuresFormat.html">sequence\r
+ features</a> or <a href="../features/annotationsFormat.html">alignment\r
+ annotations</a>.</em></li>\r
<li><strong>Close<br>\r
</strong><em>Close the alignment window. Make sure you have\r
saved your alignment before you close - either as a Jalview\r
git://source.jalview.org / jalview.git / blobdiff