JAL-958 documented logo menu items
[jalview.git] / help / html / menus / alwview.html
index 2cf52db..99eff31 100755 (executable)
        Enable or disable the display of the histogram above the consensus sequence.
        </li>
        <li>
-       <strong>Show Consensus Profile<br></strong>
+       <strong>Show Consensus Logo<br></strong>
                Enable or disable the display of the sequence logo above the consensus sequence.
        </li>
-       <li>
+                               <li><strong>Normalise Consensus Logo<br>
+                               </strong><em>When enabled, scales all logo stacks to the same height,
+                                               making it easier to compare symbol diversity in highly variable
+                                               regions.</em></li>
+
+                               <li>
        <strong>Group Conservation<br></strong>
        When ticked, display a conservation row for all groups (only available for protein alignments).
        </li>