<html>\r
-<head><title>Desktop Menu</title></head>\r
+<head><title>Desktop Menus</title></head>\r
\r
<body>\r
-<p><strong>Desktop Menu</strong></p>\r
+<p><strong>Desktop Menus</strong></p>\r
<ul>\r
<li><strong>File</strong><em> </em> \r
<ul>\r
</ul>\r
</li>\r
<li><strong>Save Project</strong><br>\r
- <em>Saves all currently open alignment windows with their current visible \r
- settings as a Jalview File, with the .jar extension. Each alignment will \r
- also save the currently active tree associated with the window, if one \r
- exists. </em></li>\r
+ <em>Saves all currently open alignment windows with their current view \r
+ settings and any associated trees, as a <a href="../features/jalarchive.html">Jalview Archive</a> (which has a .jar extension).</em></li>\r
<li><strong>Load Project</strong><br>\r
- <em>Loads Jalview file formatted alignments only. </em></li>\r
+ <em>Loads Jalview archives <strong>only</strong>.</em></li>\r
<li><strong>Quit</strong><br>\r
<em>Close Jalview. Warning - any annotations you have made on alignments \r
will be lost unless you Save your work before quitting.</em><br>\r
git://source.jalview.org / jalview.git / blobdiff