Copy consensus

[jalview.git] / help / html / releases.html

diff --git a/help/html/releases.html b/help/html/releases.html
index 1777a0f..33c4ead 100755 (executable)
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -4,9 +4,89 @@
 <p><strong>Release History</strong> </p>\r
 <table border="1">\r
   <tr> \r
-    <td><div align="center"><em><strong>Release</strong></em></div></td>\r
-    <td><div align="center"><em><strong>New Features</strong></em></div></td>\r
-    <td><div align="center"><em><strong>Issues Resolved</strong></em></div></td>\r
+    <td width="60" nowrap><div align="center"><em><strong>Release</strong></em></div></td>\r
+    <td ><div align="center"><em><strong>New Features</strong></em></div></td>\r
+    <td ><div align="center"><em><strong>Issues Resolved</strong></em></div></td>\r
+  </tr>\r
+  <tr> \r
+    <td>\r
+<div align="center"><strong>2.1.1</strong><br>\r
+        12/9/06</div></td>\r
+    <td><ul>\r
+        <li>Copy consensus sequence to clipboard</li>\r
+      </ul></td>\r
+    <td><ul>\r
+        <li>Image output - rightmost residues are rendered if sequence id panel \r
+          has been resized</li>\r
+        <li>Image output - all offscreen group boundaries are rendered </li>\r
+        <li>Annotation files with sequence references - all elements in file are \r
+          relative to sequence position</li>\r
+        <li>Mac Applet users can use Alt key for group editing</li>\r
+      </ul></td>\r
+  </tr>\r
+  <tr> \r
+    <td><div align="center"><strong>2.1</strong><br>\r
+        22/8/06</div></td>\r
+    <td><ul>\r
+        <li>MAFFT Multiple Alignment in default Web Service list</li>\r
+        <li>DAS Feature fetching</li>\r
+        <li>Hide sequences and columns</li>\r
+        <li>Export Annotations and Features</li>\r
+        <li>GFF file reading / writing</li>\r
+        <li>Associate structures with sequences from local PDB files</li>\r
+        <li>Add sequences to exisiting alignment</li>\r
+        <li>Recently opened files / URL lists</li>\r
+        <li>Applet can launch the full application</li>\r
+        <li>Applet has transparency for features (Java 1.2 required)</li>\r
+        <li>Applet has user defined colours parameter</li>\r
+        <li>Applet can load sequences from parameter &quot;sequence<em>x</em>&quot;</li>\r
+      </ul></td>\r
+    <td><ul>\r
+        <li>Redundancy Panel reinstalled in the Applet</li>\r
+        <li>Monospaced font - EPS / rescaling bug fixed</li>\r
+        <li>Annotation files with sequence references bug fixed</li>\r
+      </ul></td>\r
+  </tr>\r
+  <tr> \r
+    <td><div align="center"><strong>2.08.1</strong><br>\r
+        2/5/06</div></td>\r
+    <td><ul>\r
+        <li>Change case of selected region from Popup menu</li>\r
+        <li>Choose to match case when searching</li>\r
+        <li>Middle mouse button and mouse movement can compress / expand the visible \r
+          width and height of the alignment</li>\r
+      </ul></td>\r
+    <td><ul>\r
+        <li>Annotation Panel displays complete JNet results</li>\r
+      </ul></td>\r
+  </tr>\r
+  <tr> \r
+    <td><div align="center"><strong>2.08b</strong><br>\r
+        18/4/06</div></td>\r
+    <td>&nbsp;</td>\r
+    <td><ul>\r
+        <li>Java 1.5 bug - InternalMessageDialog fix for threads</li>\r
+        <li>Righthand label on wrapped alignments shows correct value</li>\r
+      </ul></td>\r
+  </tr>\r
+  <tr> \r
+    <td><div align="center"><strong>2.08</strong><br>\r
+        10/4/06</div></td>\r
+    <td><ul>\r
+        <li>Editing can be locked to the selection area</li>\r
+        <li>Keyboard editing</li>\r
+        <li>Create sequence features from searches</li>\r
+        <li>Precalculated annotations can be loaded onto alignments</li>\r
+        <li>Features file allows grouping of features</li>\r
+        <li>Annotation Colouring scheme added</li>\r
+        <li>Smooth fonts off by default - Faster rendering</li>\r
+        <li>Choose to toggle Autocalculate Consensus On/Off</li>\r
+      </ul></td>\r
+    <td><ul>\r
+        <li>Drag &amp; Drop fixed on Linux</li>\r
+        <li>Jalview Archive file faster to load/save, sequence descriptions saved. \r
+        </li>\r
+      </ul></td>\r
   </tr>\r
   <tr> \r
     <td><div align="center"><strong>2.07</strong><br>\r
@@ -16,12 +96,13 @@
         <li>Sequence Feature retrieval and display enhanced</li>\r
         <li>Choose to output sequence start-end after sequence name for file output</li>\r
         <li>Sequence Fetcher WSDBFetch@EBI</li>\r
+        <li>Applet can read feature files, PDB files and can be used for HTML \r
+          form input</li>\r
       </ul></td>\r
     <td><ul>\r
         <li>HTML output writes groups and features</li>\r
         <li>Group editing is Control and mouse click</li>\r
-        <li>Applet can read feature files, PDB files and can be used for HTML \r
-          form input</li>\r
+        <li>File IO bugs</li>\r
       </ul></td>\r
   </tr>\r
   <tr> \r
@@ -37,8 +118,7 @@
       </ul></td>\r
   </tr>\r
   <tr> \r
-    <td height="63">\r
-<div align="center"><strong>2.05b</strong><br>\r
+    <td height="63"> <div align="center"><strong>2.05b</strong><br>\r
         15/9/05</div></td>\r
     <td><ul>\r
         <li>Choose EPS export as lineart or text</li>\r