JAL-2325 tidy up release notes

[jalview.git] / help / html / releases.html

diff --git a/help/html/releases.html b/help/html/releases.html
index 6469c5f..4077a83 100755 (executable)
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -59,25 +59,22 @@
               for all consensus calculations
             </li>
             <li>
-              <!-- JAL-2177 -->Updated Jmol shipped with applet and
-              desktop to 14.6.4
+              <!-- JAL-2177 -->Jmol updated to version 14.6.4 (released 3rd Oct 2016)
             </li>
-            <li>
-              <!--  -->
-            </li>
-
+            <li>Updated Jalview's Certum code signing certificate
+              for 2016-2017</li>
           </ul>
           <em>Application</em>
           <ul>
             <li>
-              <!-- JAL-1723 -->Sequence ID tool tips have been tamed
-              (databases sorted alphabetically, abridged ID sets)
+              <!-- JAL-1723 -->Sequence ID tool tip presents abridged
+              set of database cross-references, sorted alphabetically
             </li>
             <li>
               <!-- JAL-2282-->New replacement token for creating URLs <em>just</em>
               from database cross references. Users with custom links
-              will receive a warning dialog asking them to update their
-              preferences.
+              will receive a <a href="webServices/urllinks.html#warning">warning
+                dialog</a> asking them to update their preferences.
             </li>
             <li>
               <!-- JAL-2287-->Cancel button and escape listener on
@@ -85,35 +82,20 @@
               Chimera session
             </li>
             <li>
-              <!-- JAL-2320-->Jalview's chimera control window closes if
+              <!-- JAL-2320-->Jalview's Chimera control window closes if
               the Chimera it is connected to is shut down
             </li>
             <li>
-              <!-- JAL-2281-->Custom URL links for database
-              cross-references are matched to database name regardless
-              of case
-            </li>
-            <li>
-              <!-- JAL-1738-->Select highlighted columns menu item and
-              keystroke (B) to mark columns containing highlighted
-              regions from structure selections or results of a Find
-              operation
+              <!-- JAL-1738-->New keystroke (B) and Select highlighted
+              columns menu item to mark columns containing
+              highlighted regions (e.g. from structure selections or results
+              of a Find operation)
             </li>
             <li>
               <!-- JAL-2284-->Command line option for batch-generation
               of HTML pages rendering alignment data with the BioJS
               MSAviewer
             </li>
-
-
-          </ul>
-          <em>Applet</em>
-          <ul>
-          </ul>
-          <em>Build and deployment</em>
-          <ul>
-            <li>Updated Jalview's Certum code signing certificate
-              for 2016-2017</li>
           </ul>
         </div></td>
       <td>
@@ -142,6 +124,17 @@
               <!--JAL-2324 -->Identical features with non-numeric scores
               could be added multiple times to a sequence
             </li>
+            <li>
+              <!--JAL-2323, JAL-2333,JAL-2335,JAL-2327 -->Disulphide
+              bond features shown as two highlighted residues rather
+              than a range in linked structure views, and treated
+              correctly when selecting and computing trees from features
+            </li>
+            <li>
+              <!-- JAL-2281-->Custom URL links for database
+              cross-references are matched to database name regardless
+              of case
+            </li>
 
           </ul>
           <em>Application</em>
@@ -183,12 +176,6 @@
               work for wrapped alignment views
             </li>
             <li>
-              <!--JAL-2335 -->Disulphide bond features shown as two
-              highlighted residues rather than a range in linked
-              structure views, and treated correctly when selecting and
-              computing trees from features
-            </li>
-            <li>
               <!--JAL-2197 -->Rename UI components for running JPred
               predictions from 'JNet' to 'JPred'
             </li>
@@ -198,22 +185,14 @@
               first annotation row
             </li>
             <li>
-              <!--JAL- -->
+              <!--JAL-2332 -->Attempting to view structure for Hen
+              lysozyme results in a PDB Client error dialog box
             </li>
           </ul>
-          <em>Applet</em>
-          <ul>
-          </ul>
-          <em>Build and deployment</em>
-          <ul>
-            <li>
-              <!-- JAL-2308, -->Failing/passing unit tests
-            </li>
-          </ul>
-          <em>New Known Issues</em>
+<!--           <em>New Known Issues</em>
           <ul>
             <li></li>
-          </ul>
+          </ul> -->
         </div>
       </td>
     </tr>