JAL-2418 typos

[jalview.git] / help / html / releases.html

diff --git a/help/html/releases.html b/help/html/releases.html
index 3301053..e39a4c1 100755 (executable)
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -71,7 +71,7 @@ li:before {
       <td width="60" nowrap>
         <div align="center">
           <strong><a name="Jalview.2.10.2">2.10.2</a><br />
-            <em>30/5/2017</em></strong>
+            <em>20/6/2017</em></strong>
         </div>
       </td>
       <td><div align="left">
@@ -91,6 +91,7 @@ li:before {
               extension when importing structure files without embedded
               names or PDB accessions
             </li>
+            <li><!-- JAL-2547 -->Amend sequence features dialog box can be opened by double clicking gaps within sequence feature extent</li>
           </ul>
           <em>Application</em>
           <ul>
@@ -126,8 +127,8 @@ li:before {
           <ul>
             <li>
               <!-- JAL-2398, -->Fixed incorrect value in BLOSUM 62 score
-              matrix - C->R should be '3'<br />Old matrix restored with
-              this one-line groovy script:<br />jalview.schemes.ResidueProperties.BLOSUM62[4][1]=3
+              matrix - C->R should be '-3'<br />Old matrix restored with
+              this one-line groovy script:<br />jalview.analysis.scoremodels.ScoreModels.instance.BLOSUM62.@matrix[4][1]=3
             </li>
             <li>
               <!-- JAL-2397 -->Fixed Jalview's treatment of gaps in PCA
@@ -135,7 +136,7 @@ li:before {
               earlier versions of Jalview, gaps matching gaps were
               penalised, and gaps matching non-gaps penalised even more.
               In the PCA calculation, gaps were actually treated as
-              non-gaps - so different costs were applied, which mean't
+              non-gaps - so different costs were applied, which meant
               Jalview's PCAs were different to those produced by
               SeqSpace.<br />Jalview now treats gaps in the same way as
               SeqSpace (ie it scores them as 0). To restore pre-2.10.2
@@ -161,7 +162,8 @@ li:before {
           <li><!-- JAL-2373 -->Percentage identity and conservation menu items do not show a tick or allow shading to be disabled</li>
           <li><!-- JAL-2385 -->Conservation shading or PID threshold lost when base colourscheme changed if slider not visible</li>
           <li><!-- JAL-2547 -->Sequence features shown in tooltip for gaps before start of features</li>
-          <li><!-- JAL-2563 -->Sequence position for ambiguous codon not shown in status bar</li> 
+          <li><!-- JAL-2576 -->Very large alignments take a long time to load</li>
+          <li><!-- JAL-2590 -->Cannot load Newick trees from eggnog ortholog database</li>
           </ul>
           <em>Application</em>
           <ul>
@@ -182,6 +184,9 @@ li:before {
               Jalview Projects rather than fetched via URL again when
               the project is loaded and the structure viewed
             </li>
+            <li><!-- JAL-1256 -->Trackpad horizontal scroll gesture adjusts start position in wrap mode</li>
+            <li><!-- JAL-2563 -->Status bar doesn't show positions for ambiguous amino acids</li>
+            <li><!-- JAL-2291 -->Hide insertions in PopUp menu excludes gaps in selection, current sequence and only within selected columns</li> 
           </ul>
           <em>Applet</em>
           <ul>
@@ -192,7 +197,6 @@ li:before {
           <em>New Known Issues</em>
           <ul>
           <li><!--  JAL-2566 -->Protein/CDS view scrolling not always in phase after a sequence motif find operation</li>
-          <li><!-- JAL-2563 -->Status bar doesn't show positions for ambiguous amino acids</li>
           <li><!-- JAL-2550 -->Importing annotation file with rows containing just upper and lower case letters are interpreted as WUSS rna secondary structure symbols</li>  
           </ul>