sequence alignment profiles to improve protein secondary\r
structure prediction <em>Proteins</em> <strong>40</strong> 502-511</li></ul>\r
</p>\r
-The function available from the <strong>Web Service→JNet Secondary Structure \r
-Prediction→ </strong> menu does two different kinds of prediction, \r
+The function available from the <strong>Web Service→Secondary\r
+Structure Prediction→JNet Secondary Structure \r
+Prediction</strong> menu does two different kinds of prediction, \r
dependent upon the currently selected region:</p> \r
<ul>\r
<li>If nothing is selected, and the displayed sequences appear to\r
<li>If a set of sequences are selected, and they appear to be aligned,\r
then the alignment will be used for a Jnet prediction on the\r
<strong>first</strong> sequence selected in the set (that is, the one\r
-that was first clicked on).\r
+nearest the top of the alignment window).\r
</li> \r
</ul>\r
<p>The result of a JNet prediction for a sequence is a new annotated\r