<html>
<!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5.1)
* Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
-->
+<head><title>Muscle Alignment</title></head>
+<body>
+<p><strong>Muscle Alignments</strong></p>
+<p>Muscle is a program for the alignment of many protein sequences.</p>
+<p>
+Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment with high
+accuracy and high throughput<br>
+<em>Nucleic Acids Research</em> <strong>32</strong>(5), 1792-97.</p>
+<p> This alignment method is applied to the selected region, if any, or the whole
+ sequence set when the <strong>Web Service→Alignment→Muscle
+ Protein Sequence Alignment</strong> menu item is selected. </p>
+</body>
+</html>