<html>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+-->
<head>
<title>What's new ?</title>
</head>
<body>
-<p><strong>What's new ?</strong></p>
+ <p>
+ <strong>What's new ?</strong>
+ </p>
+ <p>
+ The Jalview 2.7.1 release features (tbc)
+ <br /> For full
+ details see the <a href="releases.html#Jalview2.7.1">Jalview 2.7.1
+ release history</a>.
+ </p>
+ <p>
+ <strong>Highlights in Jalview Desktop Version 2.7.1</strong>
+ </p>
+ <ul>
-<p><strong>Jalview Version 2.2</strong></p>
-<p>Multiple views with different styles, colours, hidden regions for
-one alignment</p>
-<p>Easily add, amend and delete sequence features</p>
-<p>"Reload" alignment from File or URL to revert to
-original</p>
-<p>"Save" to current filename or "Save As" to
-new filename</p>
-<p>New <strong>"New Window"</strong> button on the
-"Output To Textbox" opens output window for quick 'sequence
-editing'.</p>
-<p>Set different text colour for dark or light background</p>
-<p>Right align sequence ids</p>
-<p>Set colour of lower case residues in a user defined colour scheme
-</p>
-<p>Menu Rearrangements: New <strong>Format</strong> for alignment
-layout and <strong>Select</strong> for region selection.</p>
-</p>
-<p>Menu item accelerator keys added</p>
-<p>Control-V pastes sequences to active window, Control-Shift-V
-pastes to a new window.</p>
-<p>Raise/Minimise alignment and all associated windows from desktop
-window's <strong>window</strong> menu</p>
-<p>Select and colour whole branches of a tree</p>
-<p>'New Window' button on the 'Output to Text box' alignment output
-option to open a new alignment window after editing.</p>
-<p><strong>Issues Resolved</strong></p>
-</p>
-<p>Optimisations for large alignments: faster multithreaded
-calculations and Undo/Redo system.</p>
-<p>Remove empty columns - if empty columns exist at the end of the
-alignment bug fixed.</p>
-<p>DAS feature fetching slowed down, doesn't overload DAS servers</p>
-<p>DAS feature fetching can be cancelled</p>
-<p>Correct display of > and < symbols for feature descriptions
-without explicit <html> tags.</p>
-<p>Zoom working in PCA viewer</p>
-<p>Sequence Descriptions retained after running a web service</p>
-<p> </p>
-<p>See the <a href="releases.html">Release History</a> page for
-details of all new features and resolved issues.</p>
+ <li>New Purine/Pyrimidine colour scheme</li>
+ <li>Colouring of RNA secondary structure by helices. See <a href="na/index.html">Nucleic Acid Support</a></li>
+ <li>Embedded <a href="http://www.varna.fr/">VARNA</a> RNA secondary structure viewer.
+ </ul>
+
+ <p>
+ <strong>Issues Resolved (a select list - see the <a
+ href="releases.html#Jalview2.7.1">release history</a> for full details)
+ </strong>
+ </p>
+ <p>
+ <strong>Issues in the Jalview Desktop</strong>
+ <ul>
+ </ul>
+ <strong>Issues specific to the JalviewLite Applet</strong>
+ <ul>
+ </ul>
+ <strong>Issues affecting both applet and application</strong>
+ <ul>
+ </ul>
</body>
</html>
git://source.jalview.org / jalview.git / blobdiff