<head><title>What's new ?</title></head>\r
<body>\r
<p><strong>What's new ?</strong> </p>\r
-<p>Jalview Version 2.08</p>\r
-<p> <a href="editing/index.html">Editing</a> can be locked to the selection area. \r
- Any edits made within the locked area do not affect the rest of the alignment.</p>\r
-<p> Keyboard editing - press F2 to toggle cursor mode On / Off. For a full list \r
- of keyboard controls, look <a href="keys.html">here</a>.</p>\r
-<p> <a href="features/search.html">Create sequence features from searches</a>. \r
- Previously results from searches were added as alignment positions, which was \r
- wrong. Now the search results are saved as sequence features and their visibility \r
- and colour can be modified using the <a href="features/seqfeatures.html">Sequence \r
- Feature Settings</a> window.</p>\r
-<p> Precalculated annotations can be loaded onto alignments. The <a href="features/annotationsFormat.html">Annotation \r
- File</a> format is a tab delimited set of values.</p>\r
-<p> <a href="features/featuresFormat.html">Features file</a> allows grouping of \r
- features. The <a href="features/seqfeatures.html">Sequence Feature Settings</a> \r
- window then makes it very easy to set the visibility of groups of features. \r
-</p>\r
-<p> <a href="colourSchemes/annotationColouring.html">Annotation Colouring</a> \r
- scheme added. A new colour scheme which colours columns on a per-column value.</p>\r
-<p> Smooth fonts off by default - faster rendering. Toggle on / off from the View \r
- menu, or can be set in Preferences.</p>\r
-<p> Choose to toggle Autocalculate Consensus On/Off from the Calculate menu.<br>\r
-</p>\r
+<p>Jalview Version 2.1</p>\r
+<p>The multiple sequence alignment program <a href="webServices/mafft.html">MAFFT</a> \r
+ is available from the default Web Service list.</p>\r
+<p>The sequence feature retrieval system using DBFetch from EBI has been replaced \r
+ with <a href="features/dassettings.html">DAS Feature fetching</a> capabilities.</p>\r
+<p><a href="features/hiddenRegions.html">Hide sequences and columns</a></p>\r
+<p>Export Annotations and Features</p>\r
+<p>GFF file reading / writing</p>\r
+<p>Associate structures with sequences from local PDB files</p>\r
+<p>Add sequences to existing alignment</p>\r
+<p>Recently opened files / URL lists</p>\r
+<p>Applet can launch the full application</p>\r
+<p>Applet has transparency for features (Java 1.2 required)</p>\r
+<p>Applet has user defined colours parameter</p>\r
+<p> </p>\r
<p><strong>Issues Resolved</strong></p>\r
-<p> Drag & Drop fixed on Linux</p>\r
-<p> Jalview Archive file faster to load/save, sequence descriptions saved.<br>\r
-</p>\r
+<p>Redundancy Panel reinstalled in the Applet</p>\r
+<p>Monospaced font - EPS / rescaling bug fixed</p>\r
+<p>Annotation files with sequence references bug fixed</p>\r
+<p> </p>\r
<p>See the <a href="releases.html">Release History</a> page for details of all\r
new features and resolved issues. </p>\r
</body>\r
git://source.jalview.org / jalview.git / blobdiff