-<html>\r
-<head>\r
-<title>What's new ?</title>\r
-</head>\r
-<body>\r
-<p><strong>What's new ?</strong></p>\r
-\r
-<p><strong>Jalview Version 2.3</strong></p>\r
-<ul>Jmol 11 integration<br>\r
- PDB views stored in Jalview XML files<br>\r
-Slide sequences<br>\r
-Edit sequence in place<br>\r
-EMBL CDS features<br>\r
-DAS Feature mapping<br>\r
-Feature ordering<br>\r
-Alignment Properties<br>\r
-Annotation Scores<br>\r
-Sort by scores<br>\r
-Feature/annotation editing in applet<br>\r
-</ul>\r
-<p> </p>\r
-<p><strong>Issues Resolved</strong></p>\r
-<p><br>\r
- Headless state operation in 2.2.1 <br>\r
- Incorrect and unstable DNA pairwise alignment <br>\r
- Cut and paste of sequences with annotation <br>\r
- Feature group display state in XML<br>\r
- Feature ordering in XML<br>\r
- 2.2.1 applet had no feature transparency<br>\r
- Number pad keys can be used in cursor mode<br>\r
- Structure Viewer mirror image resolved</p>\r
-<p> </p>\r
-<p>See the <a href="releases.html">Release History</a> page for\r
-details of all new features and resolved issues.</p>\r
-</body>\r
-</html>\r
+<html>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+-->
+<head>
+<title>What's new ?</title>
+</head>
+<body>
+ <p>
+ <strong>What's new ?</strong>
+ </p>
+ <p>
+ Jalview 2.8 includes a brand new logo, which you'll see in file browsers, splash screens, and also on the new look Jalview site.
+ </p>
+ <p>
+ In addition to our new look, Jalview 2.8 includes a number of new
+ features.. some of which have been in development since July 2010. The
+ highlights are below, and - as usual, for a comprehensive list, take a
+ look at the <a href="releases.html#Jalview2.8">Jalview 2.8 Release
+ Notes</a>.
+ </p>
+ <p>
+ <strong>Highlights in Jalview Desktop Version 2.8</strong>
+ </p>
+ <ul>
+
+ <li>New Purine/Pyrimidine colour scheme</li>
+ <li>Colouring of RNA secondary structure by helices. See <a href="na/index.html">Nucleic Acid Support</a></li>
+ <li>Embedded <a href="http://www.varna.fr/">VARNA</a> RNA secondary structure viewer.
+ </ul>
+
+ <p>
+ <strong>Issues Resolved (a select list - see the <a
+ href="releases.html#Jalview2.7.1">release history</a> for full details)
+ </strong>
+ </p>
+ <p>
+ <strong>Issues in the Jalview Desktop</strong>
+ <ul>
+ </ul>
+ <strong>Issues specific to the JalviewLite Applet</strong>
+ <ul>
+ </ul>
+ <strong>Issues affecting both applet and application</strong>
+ <ul>
+ </ul>
+</body>
+</html>
git://source.jalview.org / jalview.git / blobdiff