action.format = Format
action.select = Select
action.new_view = New View
+action.new_structure_view_with = Open new structure view with {0}
action.close = Close
action.add = Add
action.save_as = Save as...
label.removed_empty_columns = Removed {0} empty columns.
label.paste_newick_tree_file = Paste your Newick tree file here.
label.order_by_params = Order by {0}
-label.html_content = <html>{0}</html>
label.paste_pdb_file= Paste your PDB file here.
label.paste_pdb_file_for_sequence = Paste PDB file for sequence {0}
label.could_not_parse_newick_file = Could not parse Newick file\!\n {0}
label.paste_your_alignment_file = Paste your alignment file here
label.paste_your = Paste your
label.finished_searching = Finished searching
+label.subsequence_matches_found = {0} subsequence matches found
label.search_results= Search results {0} : {1}
label.found_match_for = Found match for {0}
label.font = Font:
label.retrieve_parse_sequence_database_records_alignment_or_selected_sequences = Retrieve and parse sequence database records for the alignment or the currently selected sequences
label.standard_databases = Standard Databases
label.fetch_embl_uniprot = Fetch from EMBL/EMBLCDS or Uniprot/PDB and any selected DAS sources
+label.fetch_uniprot_references = Fetch Uniprot references
+label.search_3dbeacons = 3D-Beacons Search
+label.find_models_from_3dbeacons = Search 3D-Beacons for 3D structures and models
+label.3dbeacons = 3D-Beacons
+label.fetch_references_for = Fetch database references for {0} sequences ?
+label.fetch_references_for_3dbeacons = 3D Beacons needs Uniprot References. Fetch database references for {0} sequences ?
label.reset_min_max_colours_to_defaults = Reset min and max colours to defaults from user preferences.
label.align_structures_using_linked_alignment_views = Superpose structures using {0} selected alignment view(s)
label.threshold_feature_display_by_score = Threshold the feature display by score.
label.web_services = Web Services
label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter.
label.let_jmol_manage_structure_colours = Let Jmol manage structure colours
-label.fetch_chimera_attributes = Fetch Chimera attributes
-label.fetch_chimera_attributes_tip = Copy Chimera attribute to Jalview feature
+label.fetch_viewer_attributes = Fetch {0} attributes
+label.fetch_viewer_attributes_tip = Copy {0} attribute to Jalview feature
label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence
label.index_web_services_menu_by_host_site = Index web services in menu by the host site
label.option_want_informed_web_service_URL_cannot_be_accessed_jalview_when_starts_up = Check this option if you want to be informed<br>when a web service URL cannot be accessed by Jalview<br>when it starts up
label.insufficient_residues = Not enough aligned residues ({0}) to perform superposition
label.create_viewer_attributes = Write Jalview features
label.create_viewer_attributes_tip = Set structure residue attributes for Jalview features
-label.attributes_set = {0} attribute values set on Chimera
+label.attributes_set = {0} attribute values set on {1}
label.sort_alignment_by_tree = Sort Alignment By Tree
label.mark_unlinked_leaves = Mark Unlinked Leaves
label.associate_leaves_with = Associate Leaves With
error.implementation_error_vamsas_doc_class_should_bind_to_type = Implementation Error: Vamsas Document Class {0} should bind to a {1} (found a {2})
error.invalid_vamsas_rangetype_cannot_resolve_lists = Invalid vamsas RangeType - cannot resolve both lists of Pos and Seg from choice!
error.implementation_error_cannot_have_null_alignment = Implementation error: Cannot have null alignment property key
+error.implementation_error_maplist_is_null = Implementation error. MapList is null for initMapType.
error.implementation_error_null_fileparse = Implementation error. Null FileParse in copy constructor
error.implementation_error_structure_selection_manager_null = Implementation error. Structure selection manager's context is 'null'
exception.ssm_context_is_null = SSM context is null
status.fetching_db_refs = Fetching db refs
status.loading_cached_pdb_entries = Loading Cached PDB Entries
status.searching_for_pdb_structures = Searching for PDB Structures
+status.searching_3d_beacons = Searching 3D Beacons
+status.no_structures_discovered_from_3d_beacons = No models discovered from 3D Beacons
status.opening_file_for = opening file for
status.colouring_structures = Colouring structures
label.font_doesnt_have_letters_defined = Font doesn't have letters defined\nso cannot be used\nwith alignment data
action.choose_annotations = Choose Annotations...
label.choose_annotations = Choose Annotations
label.find = Find
+label.in = in
label.invalid_search = Search string invalid
error.invalid_regex = Invalid regular expression
label.ignore_gaps_consensus = Ignore Gaps In Consensus
label.log_level_tooltip = Temporarily set the log level for this console. The log level will revert to {0} when this Java console is closed.
label.copy_to_clipboard = Copy to clipboard
label.copy_to_clipboard_tooltip = Copy all of the log text in this console to the system clipboard
+label.startup = Startup
+label.memory = Memory
+label.customise_memory_settings = Customise maximum memory settings
+label.memory_setting_text = New memory settings will only come into effect the next time you start Jalview
+label.maximum_memory_used = Maximum memory limited to both
+label.percent_of_physical_memory = Maximum percent of physical memory
+label.maximum_memory = Maximum absolute memory
+label.maximum_memory_tooltip = Enter memory as an integer number optionally followed by 'b', 'k', 'm', 'g' or 't'
+label.adjustments_for_this_computer = Adjustments for this computer
+label.memory_example_text = Maximum memory that would be used with these settings on this computer
+label.memory_example_tooltip = The memory allocated to Jalview is the smaller of the percentage of physical memory (default 90%) and the maximum absolute memory (default 32GB). If your computer's memory cannot be ascertained then the maximum absolute memory defaults to 8GB (if not customised).<br>Jalview will always try and reserve 512MB for the OS and at least 512MB for itself.
git://source.jalview.org / jalview.git / blobdiff