action.save_project = Save Project
action.save_project_as = Save Project as...
action.quit = Quit
+label.quit_jalview = Quit Jalview?
action.expand_views = Expand Views
action.gather_views = Gather Views
action.page_setup = Page Setup...
action.deselect_all = Deselect all
action.invert_selection = Invert selection
action.using_jmol = Using Jmol
+action.undo_changes_to_feature_settings = Undo all unapplied changes to feature settings
+action.undo_changes_to_feature_settings_and_close_the_dialog = Undo all pending changes and close the feature settings dialog
action.link = Link
action.group_link = Group Link
action.show_chain = Show Chain
label.occupancy = Occupancy
# delete Clustal - use FileFormat name instead
label.clustal = Clustal
-# label.colourScheme_<schemeName> as in JalviewColourScheme
+# label.colourScheme_<schemeName> as in JalviewColourScheme, spaces removed
label.colourScheme_clustal = Clustalx
label.colourScheme_blosum62 = BLOSUM62 Score
-label.colourScheme_%_identity = Percentage Identity
+label.colourScheme_%identity = Percentage Identity
label.colourScheme_zappo = Zappo
label.colourScheme_taylor = Taylor
label.colourScheme_hydrophobic = Hydrophobicity
-label.colourScheme_helix_propensity = Helix Propensity
-label.colourScheme_strand_propensity = Strand Propensity
-label.colourScheme_turn_propensity = Turn Propensity
-label.colourScheme_buried_index = Buried Index
+label.colourScheme_helixpropensity = Helix Propensity
+label.colourScheme_strandpropensity = Strand Propensity
+label.colourScheme_turnpropensity = Turn Propensity
+label.colourScheme_buriedindex = Buried Index
label.colourScheme_purine/pyrimidine = Purine/Pyrimidine
label.colourScheme_nucleotide = Nucleotide
-label.colourScheme_t-coffee_scores = T-Coffee Scores
-label.colourScheme_rna_helices = By RNA Helices
+label.colourScheme_t-coffeescores = T-Coffee Scores
+label.colourScheme_rnahelices = By RNA Helices
+label.colourScheme_sequenceid = Sequence ID Colour
label.blc = BLC
label.fasta = Fasta
label.msf = MSF
label.protein = Protein
label.nucleotides = Nucleotides
label.proteins = Proteins
+label.CDS = CDS
label.to_new_alignment = To New Alignment
label.to_this_alignment = Add To This Alignment
label.apply_colour_to_all_groups = Apply Colour To All Groups
label.autoadd_temp = Add Temperature Factor annotation to alignment
label.structure_viewer = Default structure viewer
label.double_click_to_browse = Double-click to browse for file
-label.chimera_path = Path to Chimera program
-label.chimera_path_tip = Jalview will first try any path entered here, else standard installation locations.<br>Double-click to browse for file.
-label.invalid_chimera_path = Chimera path not found or not executable
-label.chimera_missing = Chimera structure viewer not found.<br/>Please enter the path to Chimera (if installed),<br/>or download and install UCSF Chimera.
-label.chimera_failed = Error opening Chimera - is it installed?\nCheck path in Preferences, Structure
+label.viewer_path = Path to {0} program
+label.viewer_path_tip = Jalview will first try any path entered here, else standard installation locations.<br>Double-click to browse for file.
+label.invalid_viewer_path = Path not found or not executable
+label.viewer_missing = Structure viewer not found.<br/>Please enter the path to the executable (if installed),<br/>or download and install the program.
+label.open_viewer_failed = Error opening {0} - is it installed?\nCheck path in Preferences, Structure
label.min_colour = Minimum Colour
label.max_colour = Maximum Colour
label.no_colour = No Colour
label.jmol_help = Jmol Help
label.chimera_help = Chimera Help
label.close_viewer = Close Viewer
-label.confirm_close_chimera = This will close Jalview''s connection to {0}.<br>Do you want to close the Chimera window as well?
+label.confirm_close_viewer = This will close Jalview''s connection to {0}.<br>Do you want to close the {1} window as well?
label.all = All
label.sort_by = Sort alignment by
label.sort_by_score = Sort by Score
label.web_services = Web Services
label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter.
label.let_jmol_manage_structure_colours = Let Jmol manage structure colours
-label.let_chimera_manage_structure_colours = Let Chimera manage structure colours
label.fetch_chimera_attributes = Fetch Chimera attributes
label.fetch_chimera_attributes_tip = Copy Chimera attribute to Jalview feature
label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence
label.link_name = Link Name
label.pdb_file = PDB file
label.colour_with_jmol = Colour with Jmol
-label.colour_with_chimera = Colour with Chimera
+label.let_viewer_manage_structure_colours = Let viewer manage structure colours
+label.colour_with_viewer = Colour in structure viewer
label.superpose_structures = Superpose Structures
error.superposition_failed = Superposition failed: {0}
label.insufficient_residues = Not enough aligned residues ({0}) to perform superposition
label.generating_annotations_for_params = Generating annotations for - {0}
label.varna_params = VARNA - {0}
label.sequence_feature_settings = Sequence Feature Settings
+label.sequence_feature_settings_for = Sequence Feature Settings for {0}
+label.sequence_feature_settings_for_view = Sequence Feature Settings for view "{0}"
+label.sequence_feature_settings_for_CDS_and_Protein = Sequence Feature Settings for CDS and Protein
label.pairwise_aligned_sequences = Pairwise Aligned Sequences
label.original_data_for_params = Original Data for {0}
label.points_for_params = Points for {0}
label.marked = Marked
label.containing = containing
label.not_containing = not containing
-label.no_feature_of_type_found = No features of type {0} found.
+label.no_feature_of_type_found = No features of type {0} found
+label.no_feature_found_selection = No features of type {0} found in selection
label.submission_params = Submission {0}
label.empty_alignment_job = Empty Alignment Job
label.add_new_sbrs_service = Add a new Simple Bioinformatics Rest Service
status.loading_cached_pdb_entries = Loading Cached PDB Entries
status.searching_for_pdb_structures = Searching for PDB Structures
status.opening_file_for = opening file for
-status.colouring_chimera = Colouring Chimera
+status.colouring_structures = Colouring structures
label.font_doesnt_have_letters_defined = Font doesn't have letters defined\nso cannot be used\nwith alignment data
label.font_too_small = Font size is too small
label.error_loading_file_params = Error loading file {0}
label.structure_chooser_no_of_structures = Structure Chooser - {0} Found ({1})
info.no_pdb_entry_found_for = No PDB entry found for {0}
exception.unable_to_detect_internet_connection = Jalview is unable to detect an internet connection
-exception.fts_rest_service_no_longer_available = {0} rest services no longer available!
-exception.resource_not_be_found = The requested resource could not be found
-exception.fts_server_error = There seems to be an error from the {0} server
exception.fts_server_unreachable = Jalview is unable to reach the {0} server. \nPlease ensure that you are connected to the internet and try again.
label.nw_mapping = Needleman & Wunsch Alignment
label.sifts_mapping = SIFTs Mapping
action.prev_page= <<
label.next_page_tooltip=Next Page
label.prev_page_tooltip=Previous Page
-exception.bad_request=Bad request. There is a problem with your input.
-exception.service_not_available=Service not available. The server is being updated, try again later.
status.launching_3d_structure_viewer = Launching 3D Structure viewer...
status.fetching_3d_structures_for_selected_entries = Fetching 3D Structures for selected entries...
status.fetching_dbrefs_for_sequences_without_valid_refs = Fetching db refs for {0} sequence(s) without valid db ref required for SIFTS mapping
label.filter = Filter
label.filters = Filters
label.join_conditions = Join conditions with
+label.delete_condition = Delete this condition
label.score = Score
label.colour_by_label = Colour by label
label.variable_colour = Variable colour...
label.append_to_filename_tooltip = %n in the text will be replaced by the backup number. The text will appear after the filename. See the summary box above.
label.index_digits = Number of digits to use for the backup number (%n)
label.summary_of_backups_scheme = Summary of backup scheme
+label.scheme_examples = Scheme examples
label.increment_index = Increase appended text numbers - newest file has largest number.
label.reverse_roll = "Roll" appended text numbers - newest backup file is always number 1.
label.keep_files = Deleting old backup files
label.keep_all_backup_files = Do not delete old backup files
label.keep_only_this_number_of_backup_files = Keep only this number of most recent backup files
-label.autodelete_old_backup_files = Autodelete old backup files:
+label.autodelete_old_backup_files = Auto-delete old backup files:
label.always_ask = Always ask
label.auto_delete = Automatically delete
label.filename = filename
label.configure_feature_tooltip = Click to configure variable colour or filters
label.schemes = Schemes
label.customise = Customise
+label.custom = Custom
label.default = Default
label.single_file = Single backup
label.keep_all_versions = Keep all versions
label.rolled_backups = Rolled backup files
+label.customise_description = Select Customise, make changes, and click on OK to save your own custom scheme
+label.custom_description = Your own saved scheme
+label.default_description = Keep the last three versions of the file
+label.single_file_description = Keep the last version of the file
+label.keep_all_versions_description = Keep all previous versions of the file
+label.rolled_backups_description = Keep the last nine versions of the file from _bak.1 (newest) to _bak.9 (oldest)
+label.cancel_changes_description = Cancel changes made to your last saved Custom scheme
label.previously_saved_scheme = Previously saved scheme
label.no_backup_files = NO BACKUP FILES
label.include_backup_files = Include backup files
label.create_image_of = Create {0} image of {1}
label.click_to_edit = Click to edit, right-click for menu
label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu
+label.show_linked_features = Show {0} features
+label.on_top = on top
+label.include_linked_features = Include {0} features
+label.include_linked_tooltip = Include visible {0} features<br>converted to local sequence coordinates
+label.features_not_shown = {0} feature(s) not shown
+label.no_features_to_sort_by = No features to sort by